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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922233.1_cds_XP_016471060.1_63444
CDS Infomation

[gene=LOC107793252] [db_xref=GeneID:107793252] [protein=probable aminotransferase ACS10 isoform X2] [protein_id=XP_016471060.1] [location=join(10032..10535,11337..11462,13180..13340,13438..14281)] [gbkey=CDS]
Sequence

ATGACAAGGTCCCGGGACCGTTCACCAACAAGAACAAGAACAACAACCATTTCAACTGGC
GGCAGCGGAGGAGCGGCGGCGGCGATGAGGGTAATAGTACCCTTACAAGGAGTAGTACAA
GGCCGAGGTGGTCTTTTCTTTGGTTCAGTTATACCTTGTGCTCTTTTCTACTTCTGGCAA
CTCTACCTCAAACGTAATCGCTCCGCCGGTGACGACAATAACGGTGAATCTCCAGCTCCG
GCGAGGTCTCCGTCGTCTAGCCATTTGGCGGAAGTGTCGTCTTCTGGTTCAGGAGGGTTA
CAGAGAGTTCAGTCGTCACGTTTATTACTGTCACCTAAGGGAGCTACTGGGCCCTCTCAA
GTGTCTTCAAGAGCTAATTCTATTATTTCTAAACAAAGTGATATTAGTCCTTACTATATT
GGACTAAAAAGAGCTTCTGAGGACCCTTATGATGAGTCAAGTAATCCAGATGGTGTTATT
CAACTTGGATTAGCAGAAAACAAGTTGTCATTGGATTTAATTCAAGAATGGCTGGCAGAA
AATGTGTCAAAATGGATGATGAATCAGGATTTGAGTATAAGTGGAATAGCTACTTATCAA
CCATTTGATGGGTTGTTGGAGTTGAAAGTGGCTGTGGCAGGATTTATGTCTCAAGCTGTG
GAGAGATCAGTGTCCTTCTGCCCCTCTCAAATGGTTCTTACCACTGGTGCAACTCCTGCT
CTTGAGATACTGAGCTTCTGCCTATCTGATCCTGGAAATGCATTTCTTGTTCCCTCACCA
TATCATCTCGAGGATGTCAAATGGCGAACTGGAGTGGAGATTATACCCGTTCCTTGCCGC
AGTGCAGACAACTTTAGCTTGAGCATTGATGCTCTTGACCGAGCACTTAATCAAGCTAAG
AAACGTGGTCTTAAAGTACGAGGGATTATTATTTCTAACCCCTCAAATCCCGTAGGCAAT
CTGTTCACTAGGGAGACACTTTATAACCTCTTAGACTTTGCAACTGAGAAGAACATCCAC
GTAATATCCAATGAAATCTTGGCTGGGTCTTATGGAAGTGAAGAGTTTGTCAGCATAGCA
GAGATAATTGATTCTGAAGATTTTGACCGGAACAGGGTCCACATTGTCTATGGTCTCTCT
AAGGACCTCTCTCTTCCTGGTTTCAGGGTGGGATTAATCTATTCTTGCAATGAAAATGTT
CTAGCAGCTGCAAAAAAATTGACAAGATTCTCATCCATTTCAGTGCCAACACAGCATTTG
CTCATTCAGATGCTATCAGATGCAAAATTTGTGCAACAATTTATCAAAAAGAATAGAGAG
AGGCTCAAAAGGACGTGTTCTCTATTTGTTAGTGGATTGAAGCAGCTGGGAATTGAGTGC
ACCAAAAGTAGCGGGGGCTTCTACTGTTGGGCTGACATGAGCAGGTTAATTCGATCGTAT
AGTGAAAAGGGAGAGATTGAGCTTTGGGATAAGCTACTAAATGTAGCTAAGATCAATGTA
ACTCCTGGTTCTTCCTGCCACTGCGTTGAACCTGGGTGGTTCAGGTTATGTTTTACTACC
TTAAGTGAGAAGGATATTTCCACAGTTATGCAACGTATTCAGAAAGTTTTGGAGATGCGT
AGGTCTCTGAGTTAA

Peptide Sequence

PEP ID

XP_016471060.1
PEP Infomation

PREDICTED: probable aminotransferase ACS10 isoform X2 [Nicotiana tabacum]
Sequence

MTRSRDRSPTRTRTTTISTGGSGGAAAAMRVIVPLQGVVQGRGGLFFGSVIPCALFYFWQ
LYLKRNRSAGDDNNGESPAPARSPSSSHLAEVSSSGSGGLQRVQSSRLLLSPKGATGPSQ
VSSRANSIISKQSDISPYYIGLKRASEDPYDESSNPDGVIQLGLAENKLSLDLIQEWLAE
NVSKWMMNQDLSISGIATYQPFDGLLELKVAVAGFMSQAVERSVSFCPSQMVLTTGATPA
LEILSFCLSDPGNAFLVPSPYHLEDVKWRTGVEIIPVPCRSADNFSLSIDALDRALNQAK
KRGLKVRGIIISNPSNPVGNLFTRETLYNLLDFATEKNIHVISNEILAGSYGSEEFVSIA
EIIDSEDFDRNRVHIVYGLSKDLSLPGFRVGLIYSCNENVLAAAKKLTRFSSISVPTQHL
LIQMLSDAKFVQQFIKKNRERLKRTCSLFVSGLKQLGIECTKSSGGFYCWADMSRLIRSY
SEKGEIELWDKLLNVAKINVTPGSSCHCVEPGWFRLCFTTLSEKDISTVMQRIQKVLEMR
RSLS

Transcript Sequence

Gene sequence data has not been registered.